Step | Annotation |
---|---|
Step 1: FASTQ Groomer
select at runtime
Sanger
Hide Advanced Options
|
|
Step 2: FASTQ Groomer
select at runtime
Sanger
Hide Advanced Options
|
|
Step 3: Filter by quality
Output dataset 'output_file' from step 1
20
90
|
|
Step 4: Filter by quality
Output dataset 'output_file' from step 2
20
90
|
|
Step 5: FASTQ interlacer
Output dataset 'output' from step 3
Output dataset 'output' from step 4
|
|
Step 6: FASTQ to FASTA
Output dataset 'outfile_pairs' from step 5
|
|
Step 7: Sequence sampling
Output dataset 'output_file' from step 6
300000
10
True
|
|
Step 8: Clustering
Output dataset 'output' from step 7
True
True
0
55
0.03
Viridiplantae
False
False
40
|
jirka
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Published workflows by jirka